API for rcorty/vqtl
Genome Scans to Accommodate and Target Genetic and Non-Genetic Effects on Trait Variance in Test Crosses

Global functions
LOD Source code
LOD_from_LLs Source code
LRT Source code
LRT_from_LLs Source code
additive.component_ Source code
c.scanonevar Man page Source code
calc.empir.ps Source code
dominance.component_ Source code
effects_over_genome_plot Man page Source code
fit_dglm Source code
fit_dhglm Source code
fit_hglm Source code
fit_model Source code
formulae.is.valid.for.cross_ Source code
formulae_is_valid_ Source code
has_a_random_term Source code
initialize.scanonevar.result_ Source code
is.cross Man page Source code
is.cross.w.genoprobs Man page Source code
is.f2.cross Man page Man page Source code Source code
is.formulae Source code
is.mean.formula Source code
is.scanonevar Man page Source code
is.scanonevar.w.perms Man page Source code
is.var.formula Source code
lod2pval Source code
log_lik Source code
make.formulae_ Source code
make.genet.covar.add.dom.model.df_ Source code
make.genet.marker.model.df_ Source code
make.loc.specific.modeling.df Source code
make.phen.covar.model.df_ Source code
make.qtl.covar.model.df_ Source code
make.response.model.df_ Source code
mean_var_plot_model_based Man page Source code
mean_var_plot_model_free Man page Source code
permutation.max.finder Source code
permute.QTL.terms_ Source code
permute.mean.QTL.terms_ Source code
permute.var.QTL.terms_ Source code
phenotype_at_marker_plot Man page Source code
plot.scanonevar Man page Source code
pull.plotting.columns_ Source code
pve Man page Source code
remove.qtl.terms_ Source code
replace.markers.with.add.dom_ Source code
scanonevar Man page Source code
scanonevar.boot Man page Source code
scanonevar.boot_ Source code
scanonevar.perm Man page Source code
scanonevar.perm_ Source code
scanonevar_ Source code
summary.scanonevar Man page Source code
tryNA Source code
validate.c.scanonevar.input_ Source code
validate.mean_var_plot_model_based.input Source code
validate.mean_var_plot_model_free.input Source code
validate.scanonevar.input_ Source code
wrangle.genoprob.df_ Source code
wrangle.loc.info.df_ Source code
wrangle.scanonevar.formulae_ Source code
wrangle.scanonevar.input_ Source code
wrangle.scanonevar.modeling.df_ Source code
wrangle.scanonevar.types_ Source code
rcorty/vqtl documentation built on May 26, 2018, 5:46 a.m.