redaq/atMPRA: Analysis Toolset for MPRA data

Includes the adaptive test and a number of other methods for analyzing MPRA data, and also functions for power calculation for designing MPRA experiments. The adaptive method is described in Qiao, D., Zigler, C., Cho, M.H., Silverman, E.K., Zhou, X., et al. (2018). Statistical considerations for the analysis of massively parallel reporter assays data.

Getting started

Package details

AuthorDandi Qiao, Peter J. Castaldi
MaintainerDandi Qiao <[email protected]>
LicenseGPL-2
Version1.2
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("redaq/atMPRA")
redaq/atMPRA documentation built on March 9, 2019, 3:22 a.m.