get_transition_rate: Get the AA transition rate from the FLU transition rate...
In richelbilderbeek/bbbq: The Bilderbeek Bianchi and Bogaart Question
View source: R/get_transition_rate.R
get_transition_rate R Documentation
Get the AA transition rate from the FLU transition rate matrix
Description
Get the AA transition rate from the FLU transition rate matrix
Usage
get_transition_rate(seq_lhs, seq_rhs, transition_matrix_name)
Arguments
seq_lhs
amino acid to transition from
seq_rhs
amino acid to transition to
transition_matrix_name
the name of an amino acid transition matrix,
for example, BLOSUM62
Author(s)
Richèl J.C. Bilderbeek
richelbilderbeek/bbbq documentation built on July 27, 2023, 2:15 a.m.
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View source: R/get_transition_rate.R
| get_transition_rate | R Documentation |
Get the AA transition rate from the FLU transition rate matrix
Description
Get the AA transition rate from the FLU transition rate matrix
Usage
get_transition_rate(seq_lhs, seq_rhs, transition_matrix_name)
Arguments
seq_lhs |
amino acid to transition from |
seq_rhs |
amino acid to transition to |
transition_matrix_name |
the name of an amino acid transition matrix,
for example, |
Author(s)
Richèl J.C. Bilderbeek
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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