check_error_fun: Check that the 'error_fun' is valid.

In richelbilderbeek/pirouette: Create a Bayesian Posterior from a Phylogeny

Check that the error_fun is valid.

Description

Will stop if not.

Usage

check_error_fun(error_fun)

Arguments

error_fun

function that determines the error between a given phylogeny and a the trees in a Bayesian posterior. The function must have two arguments: the one given phylogeny, of class phylo one or more posterior trees, of class multiphylo The function must return as many errors as there are posterior trees given. The error must be lowest between identical trees. Example functions are: get_gamma_error_fun: use the absolute difference in gamma statistic get_nltt_error_fun: use the nLTT statistic

Value

nothing

Author(s)

Richèl J.C. Bilderbeek

Examples

# Check cleanup by other functions
beastier::check_empty_beaustier_folders()

check_error_fun(get_gamma_error_fun())
check_error_fun(get_nltt_error_fun())

richelbilderbeek/pirouette documentation built on Oct. 18, 2023, 3:09 p.m.