|create_blocked_dna||Create a 'blocked' DNA sequence, which is a sequence with...|
|create_mono_nuc_dna||Create a 'blocked' DNA sequence, which is a sequence with...|
|pir_is_dna_seq||Determine if the string is a lowercase DNA sequence of at...|
|pir_run||Creates a posterior from the phylogeny|
|sim_alignment||Converts a phylogeny to a random DNA alignment|
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