get_nltt_error_fun: Get an error function that uses the nLTT statistic

In richelbilderbeek/pirouette: Create a Bayesian Posterior from a Phylogeny

Get an error function that uses the nLTT statistic

Description

Get an error function that uses the nLTT statistic

Usage

get_nltt_error_fun()

Value

a numeric vector of errors

Author(s)

Richèl J.C. Bilderbeek

Examples

error_fun <- get_nltt_error_fun()

phylogeny <- ape::read.tree(text = "((A:1.5, B:1.5):1.5, C:3.0);")

tree_1 <- ape::read.tree(text = "((A:1.0, B:1.0):2.0, C:3.0);")
tree_2 <- ape::read.tree(text = "((A:2.0, B:2.0):1.0, C:3.0);")
trees <- c(tree_1, tree_2)

lowest_error <- error_fun(phylogeny, c(phylogeny))

richelbilderbeek/pirouette documentation built on Oct. 18, 2023, 3:09 p.m.