pir_plot: Plot the error 'BEAST2' makes from a known phylogeny

In richelbilderbeek/pirouette: Create a Bayesian Posterior from a Phylogeny

Plot the error 'BEAST2' makes from a known phylogeny

Description

Plot the error 'BEAST2' makes from a known phylogeny

Usage

pir_plot(pir_out, verbose = FALSE)

Arguments

pir_out	the output of pir_run
verbose	if TRUE, show more output

Value

a ggplot2 plot

Author(s)

Richèl J.C. Bilderbeek, Giovanni Laudanno

See Also

• Use create_test_pir_run_output to create a test output of pir_run.

• Use pir_plot_from_file to plot the errors after have being saved to a .csv file

• Use pir_plots to plot the output of multiple runs, for example, the output of pir_runs

Examples

pir_out <- create_test_pir_run_output(
  add_twin = TRUE,
  add_best = TRUE
)
pir_plot(pir_out)

richelbilderbeek/pirouette documentation built on Oct. 18, 2023, 3:09 p.m.