get_alignment_sequence_length: Get the sequence length of an alignment

View source: R/get_alignment_sequence_length.R

get_alignment_sequence_lengthR Documentation

Get the sequence length of an alignment

Description

It appears DNAbin stores its internals differently for alignments of different sizes. Due to that, this function is more complicated as one would expect

Usage

get_alignment_sequence_length(alignment)

Arguments

alignment

a DNA alignment, of class DNAbin

Value

the length

Author(s)

Richèl J.C. Bilderbeek

Examples

get_alignment_sequence_length(
  alignment = ape::as.DNAbin(
    x = list(species_1 = strsplit("aaaa", split = "")[[1]])
  )
)

richelbilderbeek/pirouette documentation built on Oct. 18, 2023, 3:09 p.m.