plot_alignment_from_file: Plot an alignment stored as a file
In richelbilderbeek/pirouette: Create a Bayesian Posterior from a Phylogeny
View source: R/plot_alignment_from_file.R
plot_alignment_from_file R Documentation
Plot an alignment stored as a file
Description
Plot an alignment stored as a file
Usage
plot_alignment_from_file(fasta_filename, title = "")
Arguments
fasta_filename
name of a FASTA file.
Use get_alignment_id to get the ID of the alignment
title
the plot title
alignment_params <- create_test_alignment_params()
alignment <- create_tral_file(
phylogeny = ape::rcoal(4),
alignment_params = alignment_params
)
plot_alignment_from_file(fasta_filename = alignment_params$fasta_filename)
Value
an image.DNAbin
richelbilderbeek/pirouette documentation built on Oct. 18, 2023, 3:09 p.m.
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View source: R/plot_alignment_from_file.R
| plot_alignment_from_file | R Documentation |
Plot an alignment stored as a file
Description
Plot an alignment stored as a file
Usage
plot_alignment_from_file(fasta_filename, title = "")
Arguments
fasta_filename |
name of a FASTA file. Use get_alignment_id to get the ID of the alignment |
title |
the plot title alignment_params <- create_test_alignment_params() alignment <- create_tral_file( phylogeny = ape::rcoal(4), alignment_params = alignment_params ) plot_alignment_from_file(fasta_filename = alignment_params$fasta_filename) |
Value
an image.DNAbin
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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