API for richelbilderbeek/razzo
The Error if Nature is MBD
| Global functions | |
|---|---|
| %>% | Man page |
| calc_n_taxas | Man page Source code |
| check_mbd_params | Man page |
| check_mbd_paramses | Man page Source code |
| check_misc_params | Man page |
| check_params_mbd | Man page Source code |
| check_params_misc | Man page Source code |
| check_project_folder_name | Man page Source code |
| check_razzo_experiments | Man page Source code |
| check_razzo_params | Man page Source code |
| check_razzo_params_filenames | Man page Source code |
| check_razzo_params_names | Man page Source code |
| check_traces_in_df | Man page Source code |
| clean_path | Man page Source code |
| clean_paths | Man page Source code |
| collect_all_data | Man page Source code |
| collect_esses | Man page Source code |
| collect_evidences | Man page |
| collect_marg_liks | Man page Source code |
| collect_mbd_params | Man page Source code |
| collect_n_mb_species | Man page Source code |
| collect_n_mutations | Man page Source code |
| collect_n_taxa | Man page Source code |
| collect_nltt_stats | Man page Source code |
| collect_run_times | Man page Source code |
| create_all_data_file | Man page Source code |
| create_esses_file | Man page Source code |
| create_fig_1 | Man page Source code |
| create_fig_1_file | Man page Source code |
| create_file_all_data | Man page |
| create_file_esses | Man page |
| create_file_fig_1 | Man page |
| create_file_marg_liks | Man page |
| create_file_mbd_params | Man page |
| create_file_n_mutations | Man page |
| create_file_n_taxa | Man page |
| create_file_nltt_stats | Man page |
| create_file_run_times | Man page |
| create_marg_liks_file | Man page Source code |
| create_mbd_params | Man page Source code |
| create_mbd_params_file | Man page Source code |
| create_mbd_params_table | Man page Source code |
| create_mbd_paramses | Man page Source code |
| create_misc_params | Man page Source code |
| create_n_mb_species_file | Man page Source code |
| create_n_mutations_file | Man page Source code |
| create_n_taxa_file | Man page Source code |
| create_nltt_stats_file | Man page Source code |
| create_parameters_files | Man page Source code |
| create_params_mbd | Man page |
| create_params_razzo | Man page |
| create_razzo_alignment_params | Man page Source code |
| create_razzo_beast2_options | Man page Source code |
| create_razzo_cand_experiments | Man page Source code |
| create_razzo_experiments | Man page Source code |
| create_razzo_gen_experiment | Man page Source code |
| create_razzo_mrca_prior | Man page Source code |
| create_razzo_ns_mcmc | Man page Source code |
| create_razzo_params | Man page Source code |
| create_razzo_paramses | Man page Source code |
| create_razzo_pir_params | Man page Source code |
| create_razzo_twinning_params | Man page Source code |
| create_run_times_file | Man page Source code |
| create_test_mbd_params | Man page Source code |
| create_test_mbd_paramses | Man page Source code |
| create_test_razzo_experiments | Man page Source code |
| create_test_razzo_params | Man page Source code |
| create_test_razzo_paramses | Man page Source code |
| create_test_razzo_pir_params | Man page Source code |
| default_params_doc | Man page Source code |
| get_alignment_filename | Man page Source code |
| get_best_model | Man page Source code |
| get_data_paths | Man page Source code |
| get_errors_filename | Man page Source code |
| get_evidence_filename | Man page Source code |
| get_gen_models | Man page Source code |
| get_generative_model | Man page Source code |
| get_input_filename | Man page Source code |
| get_output_log_filename | Man page Source code |
| get_output_state_filename | Man page Source code |
| get_output_trees_filenames | Man page Source code |
| get_razzo_crown_age | Man page Source code |
| get_razzo_dna_alignment_length | Man page Source code |
| get_razzo_lambdas | Man page Source code |
| get_razzo_mcmc | Man page Source code |
| get_razzo_mcmc_chain_length | Man page Source code |
| get_razzo_mcmc_store_every | Man page Source code |
| get_razzo_mus | Man page Source code |
| get_razzo_mutation_rate | Man page Source code |
| get_razzo_n_replicates | Man page Source code |
| get_razzo_nus | Man page Source code |
| get_razzo_qs | Man page Source code |
| get_results_path | Man page Source code |
| get_seed_folder_name | Man page Source code |
| get_tracelog_filename | Man page Source code |
| get_tree_filename | Man page Source code |
| get_treelog_filename | Man page Source code |
| open_parameters_file | Man page Source code |
| razzo | Man page |
| remove_cbs_exps | Man page Source code |
| run_razzo | Man page Source code |
| run_razzo_from_file | Man page Source code |
| save_razzo_paramses | Man page Source code |
| update_razzo | Man page Source code |
