clusterServer: Server function to cluster a count matrix by rows and/or...

In richysix/rnaseqVis: Viewer for RNASeq gene expression data

Server function to cluster a count matrix by rows and/or columns

Description

clusterServer() clusters the supplied counts wither by rows or columns or both

Usage

clusterServer(id, counts = NULL, gene_metadata = NULL, debug = FALSE)

Arguments

id	namespace id for the UI components. Must match the id provided to the clusterInput() function.
counts	a reactive counts object. Should contain only numeric columns
gene_metadata	a reactive object. Contains the metadata for the genes present in the counts object.
debug	Turn on debugging message statements

Value

a shiny::reactive() object which is the clustered counts

Examples

clusterServer("rnaseqData", counts = reactive(rnaseqVis::counts[1:10,1:5]))

richysix/rnaseqVis documentation built on Feb. 12, 2024, 1:37 p.m.