check_alignment: Check the alignment of mzXML files
In ricoderks/Rcpm: General functions for the Center of Proteomics and Metabolomics (LUMC)
View source: R/check_alignment.R
check_alignment R Documentation
Check the alignment of mzXML files
Description
Check the aligned mzXML files for problematic retention times.
Usage
check_alignment(files)
Arguments
files
A character vector containing all the mzXML file locations.
Details
msalign2 sometimes creates wrong retention times. The retention time of a scan is sometimes smaller then its previous scan.
Value
The function gives a message with the file name of the problematic mzXML file and returns TRUE or FALSE.
Author(s)
Rico Derks
ricoderks/Rcpm documentation built on May 18, 2022, 7:49 a.m.
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View source: R/check_alignment.R
| check_alignment | R Documentation |
Check the alignment of mzXML files
Description
Check the aligned mzXML files for problematic retention times.
Usage
check_alignment(files)
Arguments
files |
A character vector containing all the mzXML file locations. |
Details
msalign2 sometimes creates wrong retention times. The retention time of a scan is sometimes smaller then its previous scan.
Value
The function gives a message with the file name of the problematic mzXML file and returns TRUE or FALSE.
Author(s)
Rico Derks
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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