getNCC: getNCC
In ritianjiang/RTFE: RiTian's Features Extractor
Description
Usage
Arguments
Value
Description
getNCC
Usage
1
getNCC(object, seqType, n)
Arguments
object
A Benneat object
seqType
The sequence is DNA or RNA. It should be either 'DNA' or 'RNA'
n
The k of k-mer
Value
A matrix contains ALL sequences' NCC features,each row denotes
a sequence. The Sequence is sorted by its order in Benneat object. if you run
getNCC(xxx,"DNA",2), then each col will be sorted according to AA,AC,AG,AT...
TA,TC,TG,TT.
ritianjiang/RTFE documentation built on Aug. 8, 2020, 7:48 p.m.
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Description Usage Arguments Value
Description
getNCC
Usage
1 | getNCC(object, seqType, n)
|
Arguments
object |
A Benneat object |
seqType |
The sequence is DNA or RNA. It should be either 'DNA' or 'RNA' |
n |
The k of k-mer |
Value
A matrix contains ALL sequences' NCC features,each row denotes a sequence. The Sequence is sorted by its order in Benneat object. if you run getNCC(xxx,"DNA",2), then each col will be sorted according to AA,AC,AG,AT... TA,TC,TG,TT.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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