docker/README.md
In rivas-lab/snpnet: snpnet: Efficient Lasso Solver for Large SNP Data
Docker image of snpnet
We make the Docker image available at Docker Hub.
How to use the Docker image?
Docker
docker run yosuketanigawa/snpnet:latest R
> library(snpnet)
Singularity
singularity pull docker://yosuketanigawa/snpnet:latest
singularity -s exec snpnet_latest.sif R
> library(snpnet)
How to build the Docker image and push it to the Docker Hub?
docker build . -t yosuketanigawa/snpnet:latest
docker push yosuketanigawa/snpnet:latest
Version log
v1.4.1: (yosuketanigawa/snpnet:v1.4.1): We use the following versions of the softwareR from jupyter/r-notebook:2021-11-20plink2: Alpha 2.3 final (24 Jan 2020) Linux 64-bit Intelsnpnet version 1.4.1
rivas-lab/snpnet documentation built on Dec. 14, 2021, 3:22 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Docker image of snpnet
We make the Docker image available at Docker Hub.
How to use the Docker image?
Docker
docker run yosuketanigawa/snpnet:latest R
> library(snpnet)
Singularity
singularity pull docker://yosuketanigawa/snpnet:latest
singularity -s exec snpnet_latest.sif R
> library(snpnet)
How to build the Docker image and push it to the Docker Hub?
docker build . -t yosuketanigawa/snpnet:latest
docker push yosuketanigawa/snpnet:latest
Version log
v1.4.1: (yosuketanigawa/snpnet:v1.4.1): We use the following versions of the softwareRfromjupyter/r-notebook:2021-11-20plink2: Alpha 2.3 final (24 Jan 2020) Linux 64-bit Intelsnpnetversion 1.4.1
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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