convertEcodataToMSSPM: Keyrun Ecodata to MSSPM Environmental Covariate Conversion

In rklasky/rPackages: MSSPM Data Conversion Package

Description

Conversion of Keyrun (i.e., Ecodata) Environmental Covariate data to an MSSPM Covariate csv file

Usage

convertEcodataToMSSPM(colNames, inputDataFrames, region, vars, outputFile)

Arguments

colNames	The names of the covariate parameters that are used in MSSPM
region	The geographical region of interest (i.e., "GB","GOM","MAB")
vars	The description used in the data frame to specify the desired years' data
inputDataFrame	The input Ecodata data frames
outputfile	The output csv data file containing the MSSPM Covariate formatted data. N.B. The csv file must begin with "Covariate_".

Value

n/a

Examples

remotes::install_github("NOAA-EDAB/ecodata")

colNames <- list("chloro_a","bottom_temp","sea_surface_temp")
inputDataFrames <- list(ecodata::chl_pp,ecodata::bottom_temp,ecodata::seasonal_oisst_anom)
region <- "GB" # GB, GOM, or MAB (i.e., George's Bank, Gulf of Maine, Mid-Atlantic Bight)
vars <- list("ANNUAL_PPD_MEDIAN","bottom temp anomaly in situ","Spring OISST anomaly")
outputFile <- '/home/rklasky/test/Covariate_Keyrun.csv'

convertEcodataToMSSPM(colNames,inputDataFrames,region,vars,outputFile)

rklasky/rPackages documentation built on Feb. 9, 2022, 1:10 a.m.