tissueDeconResidual: Estimates tissue deconvolution using quadprog
In rmauntz/Larson_cfRNA_DarkChannelBiomarkers: A comprehensive characterization of the cell-free transcriptome reveals tissue- and subtype-specific biomarkers for cancer detection
Description
Usage
Arguments
Value
View source: R/tissueDeconResidual.R
Description
Estimates tissue deconvolution using quadprog
Usage
1
tissueDeconResidual(signatures, dataset_DeconRNASeq)
Arguments
signatures
data_frame with columns containing tissue-specific gene of different tissue.
dataset_DeconRNASeq
data_frame with columns of mixture RNA-seq samples.
Value
A data_frame with one row per containing the estimation of tissue fraction
rmauntz/Larson_cfRNA_DarkChannelBiomarkers documentation built on Jan. 30, 2021, 12:47 a.m.
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Description Usage Arguments Value
View source: R/tissueDeconResidual.R
Description
Estimates tissue deconvolution using quadprog
Usage
1 | tissueDeconResidual(signatures, dataset_DeconRNASeq)
|
Arguments
signatures |
data_frame with columns containing tissue-specific gene of different tissue. |
dataset_DeconRNASeq |
data_frame with columns of mixture RNA-seq samples. |
Value
A data_frame with one row per containing the estimation of tissue fraction
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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