ref_marker_select: marker selection from reference matrix

View source: R/utils.R

ref_marker_selectR Documentation

marker selection from reference matrix

Description

marker selection from reference matrix

Usage

ref_marker_select(mat, cut = 0.5, arrange = TRUE, compto = 1)

Arguments

mat

reference matrix

cut

an expression minimum cutoff

arrange

whether to arrange (lower means better)

compto

compare max expression to the value of next 1 or more

Value

dataframe, with gene, cluster, ratio columns

Examples

ref_marker_select(
    cbmc_ref,
    cut = 2
)

rnabioco/clustifyR documentation built on Aug. 30, 2024, 8:16 a.m.