dnase_data: DnaseI hypersensitivity data

In rnabioco/valrdata: Genomics datasets for demonstrating the valr package

Description

A dataset containing DNaseI hypersensitivity data from 20 human cell types

Usage

dnase_data

Format

A list of 20 dataframes with about 150,000-200,000 rows and 4 columns each:

chrom

chromosome

start

start position

end

end position

name

DnaseI hypersensitivity score

Source

https://s3.amazonaws.com/bedtools-tutorials/web/maurano.dnaseI.tgz

References

Maurano et al. Systematic Localization of Common Disease-Associated Variation in Regulatory DNA. Science. 2012. Vol. 337 no. 6099 pp. 1190-1195.

See Also

http://www.sciencemag.org/content/337/6099/1190.short

rnabioco/valrdata documentation built on May 27, 2019, 9:56 a.m.