segway_data: Segway encyclopedia of human regulatory elements

In rnabioco/valrdata: Genomics datasets for demonstrating the valr package

Description

A dataset containing segway annotations for 164 human cell types

Usage

segway_data

Format

A data frame with 164,785 rows and 169 columns

chrom

chromosome

start

start position

end

end position

sum_score

sum of functionality score

mean_score

average base-wise functionality score

...

segway label of each cell type in the interval

Source

http://noble.gs.washington.edu/proj/encyclopedia/segway_encyclopedia.bed.gz

References

Libbrecht MW, Rodriguez O, Hoffman MM, Bilmes JA, Noble WS. 2016. A unified encyclopedia of human functional elements through fully automated annotation of 164 human cell types. Biorxiv preprint: http://dx.doi.org/10.1101/086025.

See Also

http://noble.gs.washington.edu/proj/encyclopedia/

rnabioco/valrdata documentation built on May 27, 2019, 9:56 a.m.