Filter BLAST-results by different criteria. Removes every alignment not fulfilling the criteria
1 | filter_blast(raw_granges, min_len = 0, max_e = 100, min_identity = 0)
|
raw_granges |
A GRangesList as returned from read_blast_xml. |
min_len, max_e, min_identity |
Integer or float to filter the BLAST-results by minimum length, maximum e-value or minimum percent idenity |
grange_output |
If set TRUE, output it a GRangesList object, otherwise a data.frame object. |
keep_sequences |
If FALSE, sequence and alignment columns are discarded. |
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.