Implements the TAU algorithm to calculate tissue specificity. Given RNA-seq expression data in multiple tissues, the package calculates tissue specificity of each gene for each tissue. It also performs ranking to provide a set of optimum genes with high enough specificity and expression to facilitate experimental work in the laboratory when working on a tissue or gene of interest, or to rule out contamination of a tissue by qPCR.
Package details |
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Bioconductor views | GeneExpressionWorkflow |
Maintainer | |
License | file LICENSE |
Version | 0.99.0 |
URL | https://github.com/roonysgalbi/tispec |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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