roonysgalbi/tispec: Calculates tissue specificity from RNA-seq data
Version 0.99.0

Implementing the TAU algorithm to calculate tissue specificity. This package takes a given a set of observations in a given set of variables. It then calculates the specificity of each observation for each variable. For example: given RNA-seq counts (rpkm/fpkm/tpm etc.) in multiple tissues, calculates tissue specificity of each gene for each tissue.

Getting started

Package details

AuthorKenneth Condon <[email protected]>
Bioconductor views GeneExpression
MaintainerKenneth Condon <[email protected]>
LicenseGPL-3
Version0.99.0
URL https://github.com/roonysgalbi/tispec
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("roonysgalbi/tispec")
roonysgalbi/tispec documentation built on April 14, 2018, 4:58 a.m.