checkNdlst: Check if ndlst is correct
In ropensci/phylotaR: Automated Phylogenetic Sequence Cluster Identification from 'GenBank'
checkNdlst R Documentation
Check if ndlst is correct
Description
Return T/F fpr ndlst consistency
Usage
checkNdlst(ndlst, root)
Arguments
ndlst
ndlst
root
root ID
Details
Tests whether each node in tree points to valid other node IDs. Also
ensures 'spn' and 'root' are correct. Reports nodes that have errors.
See Also
fastCheckTreeMan, checkTreeMen
Examples
tree <- randTree(100)
(checkNdlst(tree@ndlst, tree@root))
ropensci/phylotaR documentation built on July 9, 2023, 3:17 p.m.
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| checkNdlst | R Documentation |
Check if ndlst is correct
Description
Return T/F fpr ndlst consistency
Usage
checkNdlst(ndlst, root)
Arguments
ndlst |
|
root |
root ID |
Details
Tests whether each node in tree points to valid other node IDs. Also ensures 'spn' and 'root' are correct. Reports nodes that have errors.
See Also
fastCheckTreeMan, checkTreeMen
Examples
tree <- randTree(100)
(checkNdlst(tree@ndlst, tree@root))
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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