Files in ropensci/restez
Create and Query a Local Copy of 'GenBank' in R

.Rbuildignore
.gitattributes
.github/CONTRIBUTING.md .github/issue_template.md .github/pull_request_template.md
.gitignore
.travis.yml
CONTRIBUTING.md
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md R/biomartr-tools.R R/callr-tools.R R/connection-tools.R R/db-get-tools.R R/db-setup-tools.R R/download-tools.R R/entrez-tools.R R/extract-tools.R R/filepath-tools.R R/gb-get-tools.R R/gb-setup-tools.R R/log-tools.R R/mock-tools.R R/print-tools.R R/rentrez-wrappers.R R/restez.R R/startup.R R/status-tools.R R/test-tools.R R/wrappers.R README.Rmd README.md
_pkgdown.yml
codemeta.json
data/record.rda
docs/CONTRIBUTING.html
docs/LICENSE-text.html
docs/apple-touch-icon-120x120.png
docs/apple-touch-icon-152x152.png
docs/apple-touch-icon-180x180.png
docs/apple-touch-icon-60x60.png
docs/apple-touch-icon-76x76.png
docs/apple-touch-icon.png
docs/articles/1_rodents.html
docs/articles/2_search_and_fetch.html
docs/articles/3_parsing.html
docs/articles/4_phylotar.html
docs/articles/5_tips_and_tricks.html
docs/articles/demonstration_1.html
docs/articles/download.html
docs/articles/entrez.html
docs/articles/index.html
docs/articles/my-vignette.html
docs/articles/my-vignette_files/figure-html/unnamed-chunk-1-1.png
docs/articles/my-vignette_files/figure-html/unnamed-chunk-1-2.png
docs/articles/parsing.html
docs/articles/phylotar.html
docs/articles/query.html
docs/articles/restez.html
docs/articles/rodents.html
docs/articles/search_and_fetch.html
docs/articles/tips_and_tricks.html
docs/articles/tutorial.html
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/favicon-16x16.png
docs/favicon-32x32.png
docs/favicon.ico
docs/index.html
docs/issue_template.html
docs/jquery.sticky-kit.min.js
docs/link.svg
docs/logo.png
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/pull_request_template.html
docs/reference/add_rcrd_log.html
docs/reference/cat_line.html
docs/reference/char.html
docs/reference/check_connection.html
docs/reference/check_status.html
docs/reference/cleanup.html
docs/reference/connected.html
docs/reference/connection_get.html
docs/reference/count_db_ids.html
docs/reference/create_database.html
docs/reference/create_demo_database.html
docs/reference/custom_download.html
docs/reference/custom_download2.html
docs/reference/db_create.html
docs/reference/db_delete.html
docs/reference/db_download.html
docs/reference/db_nrows_get.html
docs/reference/db_sqlngths_get.html
docs/reference/db_sqlngths_log.html
docs/reference/delete_database.html
docs/reference/demo_db_create.html
docs/reference/dir_size.html
docs/reference/download_cmd_generate.html
docs/reference/download_genbank.html
docs/reference/dwnld_path_get.html
docs/reference/dwnld_rcrd_log.html
docs/reference/entrez_fasta_get.html
docs/reference/entrez_fetch.html
docs/reference/entrez_gb_get.html
docs/reference/extract_accession.html
docs/reference/extract_by_keyword.html
docs/reference/extract_by_patterns.html
docs/reference/extract_clean_sequence.html
docs/reference/extract_definition.html
docs/reference/extract_features.html
docs/reference/extract_inforecpart.html
docs/reference/extract_keywords.html
docs/reference/extract_locus.html
docs/reference/extract_organism.html
docs/reference/extract_seqrecpart.html
docs/reference/extract_sequence.html
docs/reference/extract_version.html
docs/reference/file_download.html
docs/reference/filename_log.html
docs/reference/flatfile_read.html
docs/reference/gb_build.html
docs/reference/gb_build2.html
docs/reference/gb_definition_get.html
docs/reference/gb_df_create.html
docs/reference/gb_df_generate.html
docs/reference/gb_download.html
docs/reference/gb_extract.html
docs/reference/gb_fasta_get.html
docs/reference/gb_organism_get.html
docs/reference/gb_record_get.html
docs/reference/gb_sequence_get.html
docs/reference/gb_sql_add.html
docs/reference/gb_sql_query.html
docs/reference/gb_version_get.html
docs/reference/gbrelease_check.html
docs/reference/gbrelease_get.html
docs/reference/gbrelease_log.html
docs/reference/get_definition.html
docs/reference/get_fasta.html
docs/reference/get_organism.html
docs/reference/get_record.html
docs/reference/get_restez_path.html
docs/reference/get_sequence.html
docs/reference/get_version.html
docs/reference/handle_run.html
docs/reference/has_data.html
docs/reference/identify_downloadable_files.html
docs/reference/identify_latest_genbank_release_notes.html
docs/reference/index.html
docs/reference/is_in_db.html
docs/reference/last_add_get.html
docs/reference/last_dwnld_get.html
docs/reference/last_entry_get.html
docs/reference/latest_genbank_release.html
docs/reference/latest_genbank_release_notes.html
docs/reference/line_spinner.html
docs/reference/list_db_ids.html
docs/reference/message_missing.html
docs/reference/mock_def.html
docs/reference/mock_gb_df_generate.html
docs/reference/mock_org.html
docs/reference/mock_rec.html
docs/reference/mock_seq.html
docs/reference/predict_datasizes.html
docs/reference/print.status.html
docs/reference/quiet_connect.html
docs/reference/readme_log.html
docs/reference/record.html
docs/reference/restez.html
docs/reference/restez_connect.html
docs/reference/restez_disconnect.html
docs/reference/restez_path_check.html
docs/reference/restez_path_get.html
docs/reference/restez_path_set.html
docs/reference/restez_path_unset.html
docs/reference/restez_ready.html
docs/reference/restez_rl.html
docs/reference/restez_status.html
docs/reference/rhandle_generate.html
docs/reference/save_download_details.html
docs/reference/seshinfo_log.html
docs/reference/set_restez_path.html
docs/reference/setup.html
docs/reference/slctn_get.html
docs/reference/slctn_log.html
docs/reference/sql_path_get.html
docs/reference/stat.html
docs/reference/status_check.html
docs/reference/status_class.html
docs/reference/testdatadir_get.html
docs/reference/unset_restez_path.html
examples/count_db_ids.R examples/db_delete.R examples/demo_db_create.R examples/entrez_fetch.R examples/gb_definition_get.R examples/gb_extract.R examples/gb_fasta_get.R examples/gb_organism_get.R examples/gb_record_get.R examples/gb_sequence_get.R examples/gb_version_get.R examples/is_in_db.R examples/list_db_ids.R examples/restez_connect.R examples/restez_disconnect.R examples/restez_path_get.R examples/restez_ready.R examples/restez_status.R
inst/CITATION
logo.png
man/add_rcrd_log.Rd man/cat_line.Rd man/char.Rd man/check_connection.Rd man/cleanup.Rd man/connected.Rd man/connection_get.Rd man/count_db_ids.Rd man/custom_download.Rd man/custom_download2.Rd man/db_create.Rd man/db_delete.Rd man/db_download.Rd man/db_sqlngths_get.Rd man/db_sqlngths_log.Rd man/demo_db_create.Rd man/dir_size.Rd man/dwnld_path_get.Rd man/dwnld_rcrd_log.Rd man/entrez_fasta_get.Rd man/entrez_fetch.Rd man/entrez_gb_get.Rd man/extract_accession.Rd man/extract_by_patterns.Rd man/extract_clean_sequence.Rd man/extract_definition.Rd man/extract_features.Rd man/extract_inforecpart.Rd man/extract_keywords.Rd man/extract_locus.Rd man/extract_organism.Rd man/extract_seqrecpart.Rd man/extract_sequence.Rd man/extract_version.Rd man/file_download.Rd man/filename_log.Rd man/flatfile_read.Rd man/gb_build.Rd man/gb_build2.Rd man/gb_definition_get.Rd man/gb_df_create.Rd man/gb_df_generate.Rd man/gb_extract.Rd man/gb_fasta_get.Rd man/gb_organism_get.Rd man/gb_record_get.Rd man/gb_sequence_get.Rd man/gb_sql_add.Rd man/gb_sql_query.Rd man/gb_version_get.Rd man/gbrelease_check.Rd man/gbrelease_get.Rd man/gbrelease_log.Rd man/has_data.Rd man/identify_downloadable_files.Rd man/is_in_db.Rd man/last_add_get.Rd man/last_dwnld_get.Rd man/last_entry_get.Rd man/latest_genbank_release.Rd man/latest_genbank_release_notes.Rd man/list_db_ids.Rd man/message_missing.Rd man/mock_def.Rd man/mock_gb_df_generate.Rd man/mock_org.Rd man/mock_rec.Rd man/mock_seq.Rd man/predict_datasizes.Rd man/print.status.Rd man/quiet_connect.Rd man/readme_log.Rd man/record.Rd man/restez.Rd man/restez_connect.Rd man/restez_disconnect.Rd man/restez_path_check.Rd man/restez_path_get.Rd man/restez_path_set.Rd man/restez_path_unset.Rd man/restez_ready.Rd man/restez_rl.Rd man/restez_status.Rd man/seshinfo_log.Rd man/setup.Rd man/slctn_get.Rd man/slctn_log.Rd man/sql_path_get.Rd man/stat.Rd man/status_class.Rd man/testdatadir_get.Rd other/demonstration_1.R other/dev.R other/generate_records_data.R other/make_sure_things_work.R other/phylotar_demo.R other/random_file_tester.R other/recreate_issue_14.R other/rodent_db.R other/spell_check.R other/viral_lookup.R
paper/outline.png
paper/paper.bib
paper/paper.html
paper/paper.md
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-180x180.png
pkgdown/favicon/apple-touch-icon-60x60.png
pkgdown/favicon/apple-touch-icon-76x76.png
pkgdown/favicon/apple-touch-icon.png
pkgdown/favicon/favicon-16x16.png
pkgdown/favicon/favicon-32x32.png
pkgdown/favicon/favicon.ico
tests/test-all.R
tests/testthat/data/records.RData
tests/testthat/data/release_notes_gb224.RData
tests/testthat/test-biomartr-tools.R tests/testthat/test-callr-tools.R tests/testthat/test-connection-tools.R tests/testthat/test-db-tools.R tests/testthat/test-download-tools.R tests/testthat/test-entrez-tools.R tests/testthat/test-extract-tools.R tests/testthat/test-filepath-tools.R tests/testthat/test-gb-setup-tools.R tests/testthat/test-get-tools.R tests/testthat/test-log-tools.R tests/testthat/test-mock-tools.R tests/testthat/test-print-tools.R tests/testthat/test-rentrez-wrappers.R tests/testthat/test-startup.R tests/testthat/test-status-tools.R tests/testthat/test-test-tools.R vignettes/1_rodents.Rmd vignettes/2_search_and_fetch.Rmd vignettes/3_parsing.Rmd vignettes/4_phylotar.Rmd vignettes/5_tips_and_tricks.Rmd vignettes/restez.Rmd
ropensci/restez documentation built on Jan. 11, 2019, 5:39 p.m.