Man pages for ropensci/tacmagic
Positron Emission Tomography Time-Activity Curve Analysis

as.tacCreates a tac object from a data.frame
batch_loadLoad (+/- merge) ROIs for batch of participants
batch_tmCalculate one or more models for a batch of participants
batch_voistatObtain values from voistat files (using load_voistat() for a...
change_unitsConvert radioactivity units
cutoff_aizCutoff value calculation using method described in Aizenstein...
dvrDistribution volume ratio (DVR) for one or more ROIs
DVR_all_ref_LoganNon-invasive reference Logan method for all ROIs in tac data
DVR_ref_LoganNon-invasive reference Logan method
fake_DVRFake DVR data for vignette and package testing
load_tacLoads TAC from file for use by other functions (default is...
load_voistatReads PMOD .voistat files and optionally merges...
load_volLoads ROI volumes from file for use by other functions
plot.ref_LoganNon-invasive reference Logan plot
plot.tacPlots time activity curves from 1 or 2 participants or...
pos_anyroiDichotomize participants based on ROI cutoff values
roi_ham_fullReturn a list of larger ROIs made up of the ROIs in the...
roi_ham_pibReturn a list of merged ROIs made up of atomic ROIs in the...
roi_ham_standReturn a list of merged ROIs made up of the atomic ROIs in...
save_tacSave a tac object as a .tac file
split_pvcSubset PMOD tacs with or without PVC
suvCalculate average SUV over time window, or maximum SUV
suvrCalculate weighted SUVRs for specified regions of interest
suvr_aucCalculate SUVRs for regions of interest with AUC from...
tacmagictacmagic: PET Analysis in R
tac_roiCalculate weighted time-activity curves for specified regions...
tac_suvCalculate SUV from TAC
ropensci/tacmagic documentation built on Feb. 11, 2020, 9:34 p.m.