tss_annotate-function: Annotate the TSSs
In rpolicastro/deepTSSscrubbeR: What the Package Does (One Line, Title Case)
Description
Annotate TSSs to the nearest transcript.
Usage
1
tss_annotate(deep_obj, annotation, upstream = 1000, downstream = 1000)
Arguments
deep_obj
deep tss object
annotation
genome annotation
upstream
Bases upstream to consider promoter
downstream
Bases downstream to consider promoter
rpolicastro/deepTSSscrubbeR documentation built on March 20, 2020, 5:38 a.m.
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Description
Annotate TSSs to the nearest transcript.
Usage
1 | tss_annotate(deep_obj, annotation, upstream = 1000, downstream = 1000)
|
Arguments
deep_obj |
deep tss object |
annotation |
genome annotation |
upstream |
Bases upstream to consider promoter |
downstream |
Bases downstream to consider promoter |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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