Description Usage Arguments Value Examples
Reduce genotype probabilities (as calculated by
calc_genoprob()
) to allele probabilities.
1 | genoprob_to_alleleprob(probs, quiet = TRUE, cores = 1)
|
probs |
Genotype probabilities, as calculated from
|
quiet |
IF |
cores |
Number of CPU cores to use, for parallel calculations.
(If |
The probs
input with probabilities
collapsed to alleles rather than genotypes.
1 2 3 4 | iron <- read_cross2(system.file("extdata", "iron.zip", package="qtl2geno"))
gmap_w_pmar <- insert_pseudomarkers(iron, step=1)
probs <- calc_genoprob(iron, gmap_w_pmar, error_prob=0.002)
allele_probs <- genoprob_to_alleleprob(probs)
|
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