max_compare_geno: Find pair with most similar genotypes
In rqtl/qtl2geno: Treatment of Marker Genotypes for QTL Experiments
Description
Usage
Arguments
Value
Examples
Description
From results of compare_geno(), show the pair with most similar genotypes.
Usage
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max_compare_geno(object, ...)
## S3 method for class 'compare_geno'
max(object, ...)
Arguments
object
A square matrix with genotype comparisons for pairs
of individuals, as output by compare_geno().
...
Ignored
Value
Data frame with individual pair, proportion matches, number
of mismatches, number of matches, and total markers genotyped.
Examples
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grav2 <- read_cross2(system.file("extdata", "grav2.zip", package="qtl2geno"))
cg <- compare_geno(grav2)
max(cg)
rqtl/qtl2geno documentation built on May 28, 2019, 2:36 a.m.
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Description Usage Arguments Value Examples
Description
From results of compare_geno(), show the pair with most similar genotypes.
Usage
1 2 3 4 | max_compare_geno(object, ...)
## S3 method for class 'compare_geno'
max(object, ...)
|
Arguments
object |
A square matrix with genotype comparisons for pairs
of individuals, as output by |
... |
Ignored |
Value
Data frame with individual pair, proportion matches, number of mismatches, number of matches, and total markers genotyped.
Examples
1 2 3 | grav2 <- read_cross2(system.file("extdata", "grav2.zip", package="qtl2geno"))
cg <- compare_geno(grav2)
max(cg)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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