RAPDB-class: An S4 class to represent the first database Gene.

In rricepackage/rRice: rRice package to make easier the study of the genomic of rice

Description

This gene is specific to the database 1 that is the database "RAPDB". So it contains all the informations we can have about one gene with the "RAPDB" database.

Slots

id

The id of the gene. Many genes can have the same id because there are the same in spite of the different attributes they have.

genesIDs

the list of diferent ids it have we will use with the databases.

locus

The locus the gene belongs.

others

The others attributes the user want to add or delete.

rapDBGeneNameSynonym

an identificator

rapDBGeneSymbolSynonym

an identificator

cgsnlGeneName

an identificator

cgsnlGeneSymbol

an identificator

oryzabaseGeneNameSynonym

an identificator

oryzabaseGeneSymbolSynonym

an identificator

position

the position of the gene into the chromosome

description

a description of the gene

Examples

gene <- new("RAPDB")

rricepackage/rRice documentation built on May 24, 2019, 2:53 p.m.