bootstrap_error | Bootstrap the standard deviation of the mean |
check_pephylo | View PEPHYLO input files |
combine_pulsr_results | Combine output files |
dematlabilize_data | Export Matlab output |
estimate_error | Estimate error on the means |
estimate_spext | Esimate speciation and extinction |
fit_pulsr | Fit repeated pulsR |
is_matching_names | View PEPHYLO input files |
make_mean_pephylo | Write PEPHYLO input mean traits |
make_prior_pephylo | Anagenetic and cladogenetic rate priors for PEPHYLO |
make_spext_pephylo | PEPHYLO speciation and extinction rate priors |
make_spname_pephylo | Write species names for PEPHYLO |
make_std_pephylo | Write PEPHYLO standard deviation input |
pca_perpatch | Project bird species in patch PC space |
pca_wholebird | Project bird species in PC space |
project_individuals | Project individuals into PC space |
rearrange_by_patch | Rearrange with patches in columns |
rearrange_indiv_by_patch | Rearrange individuals with patches in columns |
remove_bad_patches | Remove patches with NAs |
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