get_ORFs: Get Open Reading Frame Data

Description Usage Arguments Value

View source: R/regions.R

Description

Find open reading frames (ORFs) of the sequence. Optionally, the ORFs can be separated into non-overlapping groups, allowing to easily plot them as genome map plots.

Usage

1
get_ORFs(seq, calc_groups = TRUE)

Arguments

seq

Sequence input.

calc_groups

If TRUE, the ORFs will be separated into non-overlapping groups.

Value

Data frame specifying start, end, and optionally interval_group for each ORF.


ruthkr/rnafolding documentation built on Jan. 9, 2021, 3:22 p.m.