Man pages for rvalieris/signeR
Empirical Bayesian approach to mutational signature discovery

cosmic_dataCOSMIC Mutational Signatures
DiffexpDifferential Exposure Analysis
ExposureClassifyClassify samples by exposure levels
ExposureClassifyCVk-fold cross-validation of sample classifcation by exposure...
ExposureCorrelationExposure correlation analysis (given a known sample feature)
ExposureFuzzyClusteringFuzzy Clustering of exposure data
ExposureGLMExposure Generalized Linear Model
ExposureHierarchicalClusteringHierarchical Clustering of exposure data
ExposureSurvivalExposure survival analysis
ExposureSurvModelExposure Cox model
genMatrixcount matrix and opportunity matrix generators
methodsSignExp class methods
plotssigneR plot functions
signeRsigneR
signeRFlowLaunch signeRFlow R Shiny web app
signeR-packageEmpirical Bayesian approach to mutational signature discovery
signexp-classSignExp class
tcga_similaritiesTCGA Cosmic similarities
tcga_tumorsTCGA tumors used on TCGA Explorer
rvalieris/signeR documentation built on April 20, 2024, 2:08 p.m.