cosmic_data: COSMIC Mutational Signatures
In rvalieris/signeR: Empirical Bayesian approach to mutational signature discovery
cosmic_data R Documentation
COSMIC Mutational Signatures
Description
COSMIC Mutational Signatures Data Files (SBS) v3.2.
Usage
data("cosmic_data")
Format
A data frame with 96 observations on the following 75 variables.
Substitution.Typea character vector
Trinucleotidea character vector
Somatic.Mutation.Typea character vector
SBS1a numeric vector
SBS2a numeric vector
SBS3a numeric vector
SBS4a numeric vector
SBS5a numeric vector
SBS6a numeric vector
SBS7aa numeric vector
SBS7ba numeric vector
SBS7ca numeric vector
SBS7da numeric vector
SBS8a numeric vector
SBS9a numeric vector
SBS10aa numeric vector
SBS10ba numeric vector
SBS11a numeric vector
SBS12a numeric vector
SBS13a numeric vector
SBS14a numeric vector
SBS15a numeric vector
SBS16a numeric vector
SBS17aa numeric vector
SBS17ba numeric vector
SBS18a numeric vector
SBS19a numeric vector
SBS20a numeric vector
SBS21a numeric vector
SBS22a numeric vector
SBS23a numeric vector
SBS24a numeric vector
SBS25a numeric vector
SBS26a numeric vector
SBS27a numeric vector
SBS28a numeric vector
SBS29a numeric vector
SBS30a numeric vector
SBS31a numeric vector
SBS32a numeric vector
SBS33a numeric vector
SBS34a numeric vector
SBS35a numeric vector
SBS36a numeric vector
SBS37a numeric vector
SBS38a numeric vector
SBS39a numeric vector
SBS40a numeric vector
SBS41a numeric vector
SBS42a numeric vector
SBS43a numeric vector
SBS44a numeric vector
SBS45a numeric vector
SBS46a numeric vector
SBS47a numeric vector
SBS48a numeric vector
SBS49a numeric vector
SBS50a numeric vector
SBS51a numeric vector
SBS52a numeric vector
SBS53a numeric vector
SBS54a numeric vector
SBS55a numeric vector
SBS56a numeric vector
SBS57a numeric vector
SBS58a numeric vector
SBS59a numeric vector
SBS60a numeric vector
SBS84a numeric vector
SBS85a numeric vector
SBS86a numeric vector
SBS87a numeric vector
SBS88a numeric vector
SBS89a numeric vector
SBS90a numeric vector
Source
https://cancer.sanger.ac.uk/signatures/documents/453/COSMIC_v3.2_SBS_GRCh38.txt
rvalieris/signeR documentation built on April 20, 2024, 2:08 p.m.
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| cosmic_data | R Documentation |
COSMIC Mutational Signatures
Description
COSMIC Mutational Signatures Data Files (SBS) v3.2.
Usage
data("cosmic_data")Format
A data frame with 96 observations on the following 75 variables.
Substitution.Typea character vector
Trinucleotidea character vector
Somatic.Mutation.Typea character vector
SBS1a numeric vector
SBS2a numeric vector
SBS3a numeric vector
SBS4a numeric vector
SBS5a numeric vector
SBS6a numeric vector
SBS7aa numeric vector
SBS7ba numeric vector
SBS7ca numeric vector
SBS7da numeric vector
SBS8a numeric vector
SBS9a numeric vector
SBS10aa numeric vector
SBS10ba numeric vector
SBS11a numeric vector
SBS12a numeric vector
SBS13a numeric vector
SBS14a numeric vector
SBS15a numeric vector
SBS16a numeric vector
SBS17aa numeric vector
SBS17ba numeric vector
SBS18a numeric vector
SBS19a numeric vector
SBS20a numeric vector
SBS21a numeric vector
SBS22a numeric vector
SBS23a numeric vector
SBS24a numeric vector
SBS25a numeric vector
SBS26a numeric vector
SBS27a numeric vector
SBS28a numeric vector
SBS29a numeric vector
SBS30a numeric vector
SBS31a numeric vector
SBS32a numeric vector
SBS33a numeric vector
SBS34a numeric vector
SBS35a numeric vector
SBS36a numeric vector
SBS37a numeric vector
SBS38a numeric vector
SBS39a numeric vector
SBS40a numeric vector
SBS41a numeric vector
SBS42a numeric vector
SBS43a numeric vector
SBS44a numeric vector
SBS45a numeric vector
SBS46a numeric vector
SBS47a numeric vector
SBS48a numeric vector
SBS49a numeric vector
SBS50a numeric vector
SBS51a numeric vector
SBS52a numeric vector
SBS53a numeric vector
SBS54a numeric vector
SBS55a numeric vector
SBS56a numeric vector
SBS57a numeric vector
SBS58a numeric vector
SBS59a numeric vector
SBS60a numeric vector
SBS84a numeric vector
SBS85a numeric vector
SBS86a numeric vector
SBS87a numeric vector
SBS88a numeric vector
SBS89a numeric vector
SBS90a numeric vector
Source
https://cancer.sanger.ac.uk/signatures/documents/453/COSMIC_v3.2_SBS_GRCh38.txt
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