Man pages for rwcrocker/SeuratAddons
Auxillary Functions for Seurat
| add_Module | Add a Gene Module Score without numeric tail |
| analyze_LR | Generate ligand-receptor table based on gene signatures |
| clean_enrichR | Clean the dirty data output of enrichr() |
| crossreference_degs | Find DE'ed ligand-receptor pairs in LR table |
| find_Correlations | Find correlations between a query and a geneset |
| get_all_degs | Wrapper for FindMarkers() with formating for downstream LR... |
| percent_Nonzero | Get percent nonzero expressing cells in Seurat obj |
| plot_composition | Plot differences in cell composition |
| plot_enrichr | Plot the output of the enrichR dataframe |
| plot_Nonzero | Plot percent of cells with any detectable expression |
| read_GO | Get genes from a downloadable Gene Ontology text file (MGI) |
| theme_seurat | Generate ggplot2 themes for common Seurat plots |
