crossreference_degs: Find DE'ed ligand-receptor pairs in LR table
In rwcrocker/SeuratAddons: Auxillary Functions for Seurat
View source: R/ligand_receptor.R
crossreference_degs R Documentation
Find DE'ed ligand-receptor pairs in LR table
Description
Find DE'ed ligand-receptor pairs in LR table
Usage
crossreference_degs(lr_table, deg_table, db_path)
Arguments
lr_table
Dataframe generated from analyze_LR()
deg_table
Dataframe generated from find_all_degs()
db_path
Path to static CellTalk database as .tsv
Value
A LR table with annotated DEGs
rwcrocker/SeuratAddons documentation built on May 7, 2022, 1:08 a.m.
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View source: R/ligand_receptor.R
| crossreference_degs | R Documentation |
Find DE'ed ligand-receptor pairs in LR table
Description
Find DE'ed ligand-receptor pairs in LR table
Usage
crossreference_degs(lr_table, deg_table, db_path)
Arguments
lr_table |
Dataframe generated from analyze_LR() |
deg_table |
Dataframe generated from find_all_degs() |
db_path |
Path to static CellTalk database as .tsv |
Value
A LR table with annotated DEGs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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