find_Correlations: Find correlations between a query and a geneset
In rwcrocker/SeuratAddons: Auxillary Functions for Seurat
find_Correlations R Documentation
Find correlations between a query and a geneset
Description
This function calculates the Pearson correlation between a query gene and
all detected genes in the Seurat object, returning a dataframe.
Specify a gene subset to improve efficiency.
Usage
find_Correlations(obj, query, subset = NULL)
Arguments
obj
Seurat object
query
Vector of genes to assess
subset
Subset of total genes in obj to correlate against
rwcrocker/SeuratAddons documentation built on May 7, 2022, 1:08 a.m.
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| find_Correlations | R Documentation |
Find correlations between a query and a geneset
Description
This function calculates the Pearson correlation between a query gene and all detected genes in the Seurat object, returning a dataframe. Specify a gene subset to improve efficiency.
Usage
find_Correlations(obj, query, subset = NULL)
Arguments
obj |
Seurat object |
query |
Vector of genes to assess |
subset |
Subset of total genes in obj to correlate against |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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