plot_composition: Plot differences in cell composition

In rwcrocker/SeuratAddons: Auxillary Functions for Seurat

Plot differences in cell composition

Description

Plot differences in cell composition

Usage

plot_composition(
  obj,
  group.by,
  split.by = NULL,
  as.pie = FALSE,
  group.levels = NULL,
  split.levels = NULL,
  label = FALSE,
  label.pct = FALSE
)

Arguments

obj	Seurat object
group.by	Meta.data column name to annotate
split.by	Meta.data column name to split plots
as.pie	Output plot as pie chart, defaults to FALSE
group.levels	Vector of levels to order group.by with
split.levels	Vector of levels to order split.by with
label	Labels to be plotted on plot instead of in legend, defaults to FALSE
label.pct	Label to be plotted with proportion, defaults to FALSE

rwcrocker/SeuratAddons documentation built on May 7, 2022, 1:08 a.m.