my.haplotypes: e-flat and m-flat parameterizations for 0,1^d
In ryamada22/Ronlyryamada:
Description
e-flat and m-flat
Usage
1
Examples
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library(MCMCpack)
d <- 3
n <- 2^d
freq <- c(rdirichlet(1,rep(1,n)))
freq
thetapsi <- my.freq2thetapsi(freq)
psi <- thetapsi[1]
theta <- thetapsi[-1]
thetapsi
eta <- my.freq2eta(freq)
eta
my.eta2freq(eta)
my.eta2thetapsi(eta)
my.theta2freq(theta)
my.theta2eta(theta)
freq <- rep(1/8,8)
freq
thetapsi <- my.freq2thetapsi(freq)
psi <- thetapsi[1]
theta <- thetapsi[-1]
thetapsi
eta <- my.freq2eta(freq)
eta
my.eta2freq(eta)
my.eta2thetapsi(eta)
my.theta2freq(theta)
my.theta2eta(theta)
dd <- 0
freq <- c(1/2-dd*3,dd,dd,dd,dd,dd,dd,1/2-dd*3)
freq
thetapsi <- my.freq2thetapsi(freq)
psi <- thetapsi[1]
theta <- thetapsi[-1]
thetapsi
eta <- my.freq2eta(freq)
eta
my.eta2freq(eta)
my.eta2thetapsi(eta)
my.theta2freq(theta)
my.theta2eta(theta)
ryamada22/Ronlyryamada documentation built on May 28, 2019, 10:43 a.m.
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Description
e-flat and m-flat
Usage
1 |
Examples
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 | library(MCMCpack)
d <- 3
n <- 2^d
freq <- c(rdirichlet(1,rep(1,n)))
freq
thetapsi <- my.freq2thetapsi(freq)
psi <- thetapsi[1]
theta <- thetapsi[-1]
thetapsi
eta <- my.freq2eta(freq)
eta
my.eta2freq(eta)
my.eta2thetapsi(eta)
my.theta2freq(theta)
my.theta2eta(theta)
freq <- rep(1/8,8)
freq
thetapsi <- my.freq2thetapsi(freq)
psi <- thetapsi[1]
theta <- thetapsi[-1]
thetapsi
eta <- my.freq2eta(freq)
eta
my.eta2freq(eta)
my.eta2thetapsi(eta)
my.theta2freq(theta)
my.theta2eta(theta)
dd <- 0
freq <- c(1/2-dd*3,dd,dd,dd,dd,dd,dd,1/2-dd*3)
freq
thetapsi <- my.freq2thetapsi(freq)
psi <- thetapsi[1]
theta <- thetapsi[-1]
thetapsi
eta <- my.freq2eta(freq)
eta
my.eta2freq(eta)
my.eta2thetapsi(eta)
my.theta2freq(theta)
my.theta2eta(theta)
|
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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