Files in ryanrsun/LungCancerAssoc
Pathway Analysis Using Summary Statistics
DESCRIPTION
Data/Euro_keeplist.txt
Data/PCs_1000G_Euro.rda
Data/bader_apr1_pathways.rda
Data/ensembl_hg19_oct17.rda
Data/ensembl_refgene_hg19_20171206.rda
Data/ensembl_refgene_hg19_20180109.rda
LungCancerAssoc.Rproj
NAMESPACE
R/PCs_1000G_Euro-data.R
R/bader_apr1_pathways-data.R
R/check_inputs.R
R/clean_1000G_raw.R
R/define_pathway_loc.R
R/gene_info-data.R
R/leave_k_out.R
R/match_ped_summary.R
R/prune_snps.R
R/query_1000G.R
R/run_pathwayanal.R
R/run_pathwayanal_part.R
R/run_tests.R
README.md
examples/example_run.R
man/PCs_1000G_Euro.Rd
man/bader_apr1_pathways.Rd
man/check_inputs.Rd
man/clean_1000G_raw.Rd
man/define_pathway_loc.Rd
man/ensembl_hg19_oct17.Rd
man/ensembl_refgene_hg19_20171206.Rd
man/ensembl_refgene_hg19_20180109.Rd
man/hello.Rd
man/match_ped_summary.Rd
man/prune_snps.Rd
man/query_1000G.Rd
man/run_pathwayanal.Rd
man/run_pathwayanal_part.Rd
man/run_tests.Rd
tests/testthat.R
tests/testthat/test_perl_vcftools.R
