Man pages for ryanrsun/LungCancerAssoc
Pathway Analysis Using Summary Statistics
| bader_apr1_pathways | Pathway table saved from 'pathways_to_test_062817_sorte.txt |
| check_inputs | Check inputs to run_pathwayanal() for errors. |
| clean_1000G_raw | clean_1000G_raw.R |
| define_pathway_loc | define_pathway_loc.R |
| ensembl_hg19_oct17 | Hg19 Gene table using mostly Ensembl annotations |
| ensembl_refgene_hg19_20171206 | Hg19 Gene table using mostly Ensembl annotations |
| ensembl_refgene_hg19_20180109 | Hg19 Gene table using mostly Ensembl (v90) annotations |
| hello | Hello, World! |
| match_ped_summary | match_ped_summary.R |
| PCs_1000G_Euro | PCs for 1000G population of 350 European subjects |
| prune_snps | prune_snps.R |
| query_1000G | query_1000G.R |
| run_pathwayanal | Basically the same as run_pathwayanal.R with an additional... |
| run_pathwayanal_part | High-level function to control pathway analysis. |
| run_tests | run_tests.R |
