Files in rzaied/scSubset
Visualize the effect of cell count in a scRNA-seq analysis pipeline
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/autoClustering.R
R/computeCost.R
R/findConservedMarkers.R
R/findDEgenes.R
R/findMarkerGenes.R
R/integration.R
R/loadData.R
R/server.R
R/startApp.R
R/ui.R
README.md
figures/MG_stats.png
figures/PBMCs_ari_nmi.png
figures/PBMCs_upset_plot.png
figures/overview.png
inst/extdata/about.html
inst/extdata/pbmc_filtered_feature_bc_matrix/barcodes.tsv.gz
inst/extdata/pbmc_filtered_feature_bc_matrix/features.tsv.gz
inst/extdata/pbmc_filtered_feature_bc_matrix/matrix.mtx.gz
man/Mode.Rd
man/computeCost.Rd
man/computeCostUI.Rd
man/conservedMarkersUI.Rd
man/findConservedMarkers.Rd
man/findDEgenes.Rd
man/findDEgenesUI.Rd
man/findMarkerGenes.Rd
man/findMarkerGenesUI.Rd
man/make_seurat_obj.Rd
man/projectClusters.Rd
man/read_10x.Rd
man/read_h5.Rd
man/renameClusters.Rd
man/scClustering.Rd
man/scClusteringUI.Rd
man/scIntegrate.Rd
man/scSubsetGo.Rd
man/scVarGenes.Rd
man/server.Rd
man/tableParserCMG.Rd
man/tableParserDEG.Rd
man/tableParserMG.Rd
man/ui.Rd
man/varGenesUI.Rd
scSubset.Rproj
