scClustering: Single Cell Cluster Tab Server

In rzaied/scSubset: Visualize the effect of cell count in a scRNA-seq analysis pipeline

Description

Single Cell Cluster Tab Server

Usage

scClustering(input, output, session, seurat, mito, res, dataset1_name)

Arguments

seurat	Reactive value containing seurat object
mito	Reactive value containing user input for mitochondrial genes pattern
res	Reactive value containing user input for clustering resolution
dataset1_name	Reactive value containing user input of uploaded dataset name

Value

Returns a Reactive value containing list of downsampled seurat objects with reduced dimensions (PCA data) and scaled counts

rzaied/scSubset documentation built on Dec. 22, 2021, 8:19 p.m.