filled.contour.lines: Color Filled Contour Plot with multiple options

In s-cosseddu/RMD: General function to analyse MD simulations

Description

Create Filled Contour Plot providing a number of useful option on top of the standard functions. Number of contour levels (Nlev.con) is automatically computed as Nlev.con <- (max.level - min.level)*scaleLev

Usage

filled.contour.lines(x, y = NULL, z = NULL, Nlev = NULL, scaleLev = 1,
  hlines = NULL, vlines = NULL, linessize = 1, sizeaxis = 1.6,
  contlwd = 1, ...)

Arguments

x	input data, as 3d matrix or x vector
y	vector if x is a vector (default NULL)
z	vector if x is a vector (default NULL)
Nlev	Number of color levels. Using Nlev=NULL (default) means Nlev=Nlev.con (as in the description)
scaleLev	Used to compute Nlev.con, see description, (default=1)
hlines	y intercepts of horizontal lines to draw on top of the plot
vlines	x intercepts of vertical lines to draw on top of the plot
linessize	line width of the optional vertical and horizontal lines (default 1)
sizeaxis	see cex.axis (default 1.6)
contlwd	line width of the contour lines (default 1)
...	Additional arguments passed to filled.contour()

Examples

pmf <- read.table("pmf.dat")
names(pmf) <- c("zK12","zK3", "fes")
pmfmatrix <- acast(pmf, zK12 ~ zK3 )
pmf.x <- as.numeric(rownames(pmfmatrix) )
pmf.y <- as.numeric( colnames(pmfmatrix) )
fillcont.lines(pmf.x, pmf.y, pmfmatrix, Nlev=100,Nlev.con=3, color=palette.redtoblue, ylab=expression(z[K3]), xlab=expression(xy[K3]))

s-cosseddu/RMD documentation built on May 28, 2019, 10:46 a.m.