sce: SingleCellExperiment object containing scRNAseq data...
In saeyslab/multinichenetr: MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data
sce R Documentation
SingleCellExperiment object containing scRNAseq data (subsampled)
Description
SingleCellExperiment object containing scRNAseq data (subsampled). Source of the data: Puram et al., Cell 2017: “Single-Cell Transcriptomic Analysis of Primary and Metastatic Tumor Ecosystems in Head and Neck Cancer.”. This example data was downsampled (features and cells). Interesting metadata/colData columns: tumor, pEMT, pEMT_fine, celltype, batch
Usage
sce
Format
An object of class SingleCellExperiment
saeyslab/multinichenetr documentation built on Jan. 15, 2025, 7:55 p.m.
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| sce | R Documentation |
SingleCellExperiment object containing scRNAseq data (subsampled)
Description
SingleCellExperiment object containing scRNAseq data (subsampled). Source of the data: Puram et al., Cell 2017: “Single-Cell Transcriptomic Analysis of Primary and Metastatic Tumor Ecosystems in Head and Neck Cancer.”. This example data was downsampled (features and cells). Interesting metadata/colData columns: tumor, pEMT, pEMT_fine, celltype, batch
Usage
sce
Format
An object of class SingleCellExperiment
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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