saeyslab/nichenetr: NicheNet: Modeling Intercellular Communication by Linking Ligands to Target Genes

This package allows you the investigate intercellular communication from a computational perspective. More specifically, it allows to investigate how interacting cells influence each other's gene expression. Functionalities of this package (e.g. including predicting extracellular upstream regulators and their affected target genes) build upon a probabilistic model of ligand-target links that was inferred by data-integration.

Getting started

Package details

Maintainer
LicenseGPL-3
Version1.0.0
URL https://github.com/saeyslab/nichenetr
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("saeyslab/nichenetr")
saeyslab/nichenetr documentation built on July 9, 2020, 2:46 p.m.