annotation_data_sources: Annotation table of all data sources used in the NicheNet...
In saeyslab/nichenetr: NicheNet: Modeling Intercellular Communication by Linking Ligands to Target Genes
annotation_data_sources R Documentation
Annotation table of all data sources used in the NicheNet model
Description
A data.frame/tibble describing for each type of data source the "parent" database and type of interactions it countains.
Usage
annotation_data_sources
Format
A data frame/tibble
- source
Name of the data source
- database
Name of the comprehensive database to which the data source belongs
- type_db
Type of data source
- type_interaction
Interaction type
- network
Network layer to which the data source belongs: ligand_receptor, signaling or gene_regulatory
saeyslab/nichenetr documentation built on March 26, 2024, 9:22 a.m.
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| annotation_data_sources | R Documentation |
Annotation table of all data sources used in the NicheNet model
Description
A data.frame/tibble describing for each type of data source the "parent" database and type of interactions it countains.
Usage
annotation_data_sources
Format
A data frame/tibble
- source
Name of the data source
- database
Name of the comprehensive database to which the data source belongs
- type_db
Type of data source
- type_interaction
Interaction type
- network
Network layer to which the data source belongs: ligand_receptor, signaling or gene_regulatory
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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