UniprotIDdream: Uniprot identifiers for proteins in DreamModel
In saezlab/CNORfeeder: Integration of CellNOptR to add missing links
UniprotIDdream R Documentation
Uniprot identifiers for proteins in DreamModel
Description
This data object contains the Uniprot identifiers corresponding to DreamModel of CellNOptR package, in order to associat them with the corresponding nodes in the protein-protein interaction network (PPINigraph).
Usage
UniprotIDdream
Format
UniprotIDdream is a list where each element is a protien of the DreamModel and is associated with the respective Uniprot identifiers.
Source
This data object is manually derived from the Uniprot database.
References
F. Eduati, J. De Las Rivas, B. Di Camillo, G. Toffolo, J. Saez-Rodriguez. Integrating literature-constrained and data-driven inference of signalling networks. Bioinformatics, 28(18):2311-2317, 2012.
J. Saez-Rodriguez, L. G. Alexopoulos, J. Epperlein, R. Samaga, D. A.
Lauffenburger, S. Klamt and P. K. Sorger. Discrete logic modeling as a means to
link protein signaling networks with functional analysis of mammalian signal
transduction, Molecular Systems Biology, 5:331, 2009.
saezlab/CNORfeeder documentation built on Feb. 14, 2023, 3:23 p.m.
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| UniprotIDdream | R Documentation |
Uniprot identifiers for proteins in DreamModel
Description
This data object contains the Uniprot identifiers corresponding to DreamModel of CellNOptR package, in order to associat them with the corresponding nodes in the protein-protein interaction network (PPINigraph).
Usage
UniprotIDdream
Format
UniprotIDdream is a list where each element is a protien of the DreamModel and is associated with the respective Uniprot identifiers.
Source
This data object is manually derived from the Uniprot database.
References
F. Eduati, J. De Las Rivas, B. Di Camillo, G. Toffolo, J. Saez-Rodriguez. Integrating literature-constrained and data-driven inference of signalling networks. Bioinformatics, 28(18):2311-2317, 2012.
J. Saez-Rodriguez, L. G. Alexopoulos, J. Epperlein, R. Samaga, D. A. Lauffenburger, S. Klamt and P. K. Sorger. Discrete logic modeling as a means to link protein signaling networks with functional analysis of mammalian signal transduction, Molecular Systems Biology, 5:331, 2009.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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