saezlab/CNORfeeder: Integration of CellNOptR to add missing links

This package integrates literature-constrained and data-driven methods to infer signalling networks from perturbation experiments. It permits to extends a given network with links derived from the data via various inference methods and uses information on physical interactions of proteins to guide and validate the integration of links.

Getting started

Package details

AuthorF.Eduati
Bioconductor views Bioinformatics CellBasedAssays CellBiology NetworkInference Proteomics
MaintainerF.Eduati <[email protected]>
LicenseGPL-3
Version1.19.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("saezlab/CNORfeeder")
saezlab/CNORfeeder documentation built on Jan. 14, 2018, 9:09 a.m.