extract_subnetwork: extract_subnetwork

In saezlab/PHONEMeS: tool to run PHONEMeS on phosphoproteomic data

extract_subnetwork

Description

This function extracts smaller sub networks from the run_phonemes output

Usage

extract_subnetwork(phonemes_res, targets, n_steps = 3, mode = "all")

Arguments

phonemes_res	Phonemes result from the run_phonemes function
targets	Network nodes, starting point for the extraction of the sub network
n_steps	Number of steps to extract down- or upstream of targets
mode	Character constant to specify direction of the extraction. "In" for upstream nodes, "out" for downstream nodes and "all" for both.

Value

Phonemes sub network

saezlab/PHONEMeS documentation built on May 2, 2024, 11:12 a.m.