map_pathways_to_metabolites: 'map_pathways_to_metabolites'
In saezlab/ocean: metabolic enzyme enrichment analysis
View source: R/support_metabolite_enrichment.R
map_pathways_to_metabolites R Documentation
map_pathways_to_metabolites
Description
Function to map pathways to enzymes and subsequently to metabolites.
Usage
map_pathways_to_metabolites(metab_df, pathways = redHuman_pathways)
Arguments
metab_df
data frame with metabolites and their target/source enzymes
pathways
the pathway collection to be used to create a
metabolite/pathway table. by default the pathway ontology of redHuman is used.
Value
data frame containing metabolites and their pathways
saezlab/ocean documentation built on Nov. 12, 2024, 5 a.m.
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View source: R/support_metabolite_enrichment.R
| map_pathways_to_metabolites | R Documentation |
map_pathways_to_metabolites
Description
Function to map pathways to enzymes and subsequently to metabolites.
Usage
map_pathways_to_metabolites(metab_df, pathways = redHuman_pathways)
Arguments
metab_df |
data frame with metabolites and their target/source enzymes |
pathways |
the pathway collection to be used to create a metabolite/pathway table. by default the pathway ontology of redHuman is used. |
Value
data frame containing metabolites and their pathways
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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